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KCNJ11-Related Congenital Hyperinsulinism via the KCNJ11 Gene

Summary and Pricing

Test Method

Sequencing and CNV Detection via NextGen Sequencing using PG-Select Capture Probes
Test Code Test Copy GenesTest CPT Code Gene CPT Codes Copy CPT Codes Base Price
KCNJ11 81403 81403,81479 $990
Test Code Test Copy Genes Test CPT Code Gene CPT Codes Copy CPT Code Base Price
7717KCNJ1181403 81403,81479 $990 Order Options and Pricing

Pricing Comments

Testing run on PG-select capture probes includes CNV analysis for the gene(s) on the panel but does not permit the optional add on of exome-wide CNV analysis. Any of the NGS platforms allow reflex to other clinically relevant genes, up to whole exome or whole genome sequencing depending upon the base platform selected for the initial test.

An additional 25% charge will be applied to STAT orders. STAT orders are prioritized throughout the testing process.

This test is also offered via a custom panel (click here) on our exome or genome backbone which permits the optional add on of exome-wide CNV or genome-wide SV analysis.

Turnaround Time

3 weeks on average for standard orders or 2 weeks on average for STAT orders.

Please note: Once the testing process begins, an Estimated Report Date (ERD) range will be displayed in the portal. This is the most accurate prediction of when your report will be complete and may differ from the average TAT published on our website. About 85% of our tests will be reported within or before the ERD range. We will notify you of significant delays or holds which will impact the ERD. Learn more about turnaround times here.

Targeted Testing

For ordering sequencing of targeted known variants, go to our Targeted Variants page.

EMAIL CONTACTS

Genetic Counselors

Geneticist

  • Fang Xu, PhD, FACMG

Clinical Features and Genetics

Clinical Features

Congenital hyperinsulinism (CHI) is a clinically and genetically heterogeneous condition characterized by hypoglycemia (Glaser, B. et al. GeneReviews, 2003; Arnoux, J.B. et al. Early Hum Dev 86(5):287-294, 2010). The age of disease onset ranges from the neonatal period with severe forms to infancy or childhood with milder forms. Severe patients typically have extremely low serum glucose while milder cases present with variable hypoglycemia. Affected newborns also develop nonspecific symptoms including seizures, apnea, hypotonia, and poor feeding. Severity of disease manifestations can vary within the same family.

Genetics

CHI is genetically caused by defects in genes involved in regulation of insulin secretion from pancreatic beta-cells (Kapoor, R. et al. Eur J Endocrinol 168(4):557-564, 2013; Snider, K. et al. J Clin Endocrinol Metab 98(2):E355-563, 2013). KCNJ11-related congenital hyperinsulinism can be inherited in an autosomal recessive or dominant manner. KCNJ11 is a single exon gene that encodes the Kir6.2 subunit of the ATP-sensitive potassium (KATP) channels in beta-cells. Genetic defects located throughout the KCNJ11 gene include missense, nonsense, regulatory, and small deletion/insertions (Human Gene Mutation Database). While CHI patients with recessive KCNJ11 mutations are medically unresponsive to the KATP channel agonist diazoxide, dominant KCNJ11 mutations are exclusively associated with diazoxide-responsive patients (Kapoor, R. et al., 2013; Snider, K. et al., 2013).

Other genes have also been associated with CHI including ABCC8 (the other KATP gene), GLUD1, GCK, HADH, SLC16A1, HNF4A, HNF1A and UCP2 (Kapoor, R. et al., 2013; Snider, K. et al., 2013; González-Barroso, M. et al. PLoS One 3(12):e3850, 2008).

Clinical Sensitivity - Sequencing with CNV PG-Select

In a cohort of 417 CHI patients studied at the Hyperinsulinism Center in The Children’s Hospital of Philadelphia (CHOP), approximately 11% (23/213) of mutations, regardless of inheritance pattern, were identified in the KCNJ11 gene via DNA sequencing (Snider, K. et al. J Clin Endocrinol Metab 98(2):E355-563, 2013). In another cohort of 300 CHI patients studied in the United Kingdom (Kapoor, R. et al. Eur J Endocrinol 168(4):557-564, 2013), KCNJ11 mutations identified via DNA sequencing were found in 10 out of 105 (9.5%) diazoxide-nonresponsive CHI patients including 6 patients with homozygous mutations and 4 patients affected by focal disease with a paternally inherited mutation. Only one of 183 diazoxide-responsive CHI patients had a heterozygous dominant KCNJ11 mutation.

Testing Strategy

This test provides full coverage of the single exon of the KCNJ11 gene plus ~10 bases of flanking noncoding DNA and ~120 bp upstream of the start codon. We define full coverage as >20X NGS reads or Sanger sequencing.

Indications for Test

Candidates for this test are patients with CHI, especially diazoxide-nonresponsive patients. Testing is also indicated for family members of patients who have known KCNJ11 mutations. This test may also be considered for the reproductive partners of individuals who carry pathogenic variants in KCNJ11.

Gene

Official Gene Symbol OMIM ID
KCNJ11 600937
Inheritance Abbreviation
Autosomal Dominant AD
Autosomal Recessive AR
X-Linked XL
Mitochondrial MT

Disease

Name Inheritance OMIM ID
Hyperinsulinemic Hypoglycemia, Familial, 2 AR 601820

Related Test

Name
Congenital Hyperinsulinism Panel

Citations

  • Arnoux J.B. et al. 2010. Early Human Development. 86: 287-94. PubMed ID: 20550977
  • Glaser B. 2003. Familial Hyperinsulinism. In: Pagon RA, Adam MP, Ardinger HH, Bird TD, Dolan CR, Fong C-T, Smith RJ, and Stephens K, editors. GeneReviews(®), Seattle (WA): University of Washington, Seattle. PubMed ID: 20301549
  • González-Barroso M.M. et al. 2008. Plos One. 3: e3850. PubMed ID: 19065272
  • Human Gene Mutation Database (Bio-base).
  • Kapoor R.R. et al. 2013. European Journal of Endocrinology / European Federation of Endocrine Societies. 168: 557-64. PubMed ID: 23345197
  • Snider K.E. et al. 2013. The Journal of Clinical Endocrinology and Metabolism. 98: E355-63. PubMed ID: 23275527

Ordering/Specimens

Ordering Options

We offer several options when ordering sequencing tests. For more information on these options, see our Ordering Instructions page. To view available options, click on the Order Options button within the test description.

myPrevent - Online Ordering

  • The test can be added to your online orders in the Summary and Pricing section.
  • Once the test has been added log in to myPrevent to fill out an online requisition form.
  • PGnome sequencing panels can be ordered via the myPrevent portal only at this time.

Requisition Form

  • A completed requisition form must accompany all specimens.
  • Billing information along with specimen and shipping instructions are within the requisition form.
  • All testing must be ordered by a qualified healthcare provider.

For Requisition Forms, visit our Forms page

If ordering a Duo or Trio test, the proband and all comparator samples are required to initiate testing. If we do not receive all required samples for the test ordered within 21 days, we will convert the order to the most effective testing strategy with the samples available. Prior authorization and/or billing in place may be impacted by a change in test code.


Specimen Types

Specimen Requirements and Shipping Details

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ORDER OPTIONS

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2) Select Additional Test Options

No Additional Test Options are available for this test.

Note: acceptable specimen types are whole blood and DNA from whole blood only.
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